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Structure of the monomeric 8-kda dynein light chain and mechanism of domain swapped dimer assembly

Analyse Structure of the monomeric 8-kda dynein light chain and mechanism of domain… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1PWJ
Type: protein
Length: 89 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Dynein light chain-2
UniProt: Q9D0M5
Pockets: 1 · best druggability 0.32

Structure

solution nmr · 1 distinct chain · 35% helix, 26% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Dynein light chain-2	protein	89	35% helix, 26% strand	Q9D0M5

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	56	0.32	0.76	13	empty

Compared structures

1PWJ · Structure of the Monomeric 8-kDa Dynein Light Chain and Mechanism of Domain Swapped Dimer… · the same entry in another collection · chain A against A, TM-score 1.00
Q9D0M5 · AlphaFold monomer V2.0 prediction for dynein light chain 2, cytoplasmic (Q9D0M5) · a predicted model of the same protein · chain A against A, TM-score 0.79

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9D0M5
Elsewhere: RCSB PDB 1PWJ · PDBe 1PWJ · UniProt Q9D0M5

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