Research workbench
Structure of de novo designed tunable symmetric protein pockets
Analyse Structure of de novo designed tunable symmetric protein pockets in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7RMX
- Type
- protein
- Length
- 229 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Tunable symmetric protein, D_3_212
- Pockets
- 2 · best druggability 0.33
Structure
x-ray diffraction · 1 distinct chain · 89% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Tunable symmetric protein, D_3_212 | protein | 229 | 89% helix, 0% strand | — |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 78 | 0.33 | 0.75 | 15 | empty |
| 2 | 50 | 0.29 | 0.76 | 12 | empty |
Compared structures
- 7RMX · Structure of De Novo designed tunable symmetric protein pockets · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 7RMX · PDBe 7RMX
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