Research workbench
Crystal structure of the glycerol-3-phosphate transporter from E.COLI
Analyse Crystal structure of the glycerol-3-phosphate transporter from E.COLI in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1PW4
- Type
- protein
- Length
- 434 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Glycerol-3-phosphate transporter
- UniProt
- P08194
- Pockets
- 4 · best druggability 0.73
Structure
x-ray diffraction · 1 distinct chain · 75% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Glycerol-3-phosphate transporter | protein | 434 | 75% helix, 0% strand | P08194 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 562 | 0.73 | 0.81 | 46 | empty |
| 2 | 62 | 0.57 | 0.89 | 18 | empty |
| 3 | 120 | 0.49 | 0.80 | 27 | empty |
| 4 | 75 | 0.34 | 0.75 | 22 | empty |
Compared structures
- 1PW4 · Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli · the same entry in another collection · chain A against A, TM-score 1.00
- P08194 · AlphaFold monomer V2.0 prediction for glycerol-3-phosphate transporter (P08194) · a predicted model of the same protein · chain A against A, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P08194
- Elsewhere: RCSB PDB 1PW4 · PDBe 1PW4 · UniProt P08194
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