Research workbench

Griffithsin variant Y28W/Y68W/Y110W

Analyse Griffithsin variant Y28W/Y68W/Y110W in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 7RIC
Type: protein
Length: 121 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Griffithsin
UniProt: P84801
Pockets: 1 · best druggability 0.39

Structure

x-ray diffraction · 1 distinct chain · 0% helix, 56% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Griffithsin	protein	121	0% helix, 56% strand	P84801

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	68	0.39	0.79	16	empty

Compared structures

7RIC · Griffithsin variant Y28W/Y68W/Y110W · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P84801
Elsewhere: RCSB PDB 7RIC · PDBe 7RIC · UniProt P84801

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