Research workbench
Crystal structure of rok family protein from burkholderia vietnamiensis G4
Analyse Crystal structure of rok family protein from burkholderia vietnamiensis G4 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7RHE
- Type
- protein
- Length
- 368 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Rok family protein
- UniProt
- A4JE13
- Pockets
- 5 · best druggability 0.72
Structure
x-ray diffraction · 1 distinct chain · 47% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Rok family protein | protein | 368 | 47% helix, 20% strand | A4JE13 |
Pockets
5 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 196 | 0.72 | 0.89 | 50 | empty |
| 2 | 232 | 0.56 | 0.78 | 27 | empty |
| 3 | 122 | 0.50 | 0.80 | 20 | empty |
| 4 | 138 | 0.44 | 0.76 | 24 | empty |
| 5 | 53 | 0.29 | 0.75 | 14 | empty |
Compared structures
- 7RHE · Crystal Structure of ROK family protein from Burkholderia vietnamiensis G4 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A4JE13
- Elsewhere: RCSB PDB 7RHE · PDBe 7RHE · UniProt A4JE13
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