Research workbench
Structure of protein of unknown function ywqg from bacillus subtilis
Analyse Structure of protein of unknown function ywqg from bacillus subtilis in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1PV5
- Type
- protein
- Length
- 261 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Hypothetical protein ywqg
- UniProt
- P96719
- Pockets
- 2 · best druggability 0.39
Structure
x-ray diffraction · 1 distinct chain · 20% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Hypothetical protein ywqg | protein | 261 | 20% helix, 26% strand | P96719 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 52 | 0.39 | 0.81 | 15 | empty |
| 2 | 66 | 0.35 | 0.77 | 16 | empty |
Modifications
Observed in the structure: 7 modified (engineered).
Compared structures
- 1PV5 · Structure of Protein of Unknown Function YwqG from Bacillus subtilis · the same entry in another collection · chain A against A, TM-score 1.00
- P96719 · AlphaFold monomer V2.0 prediction for uncharacterized protein ywqg (P96719) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P96719
- Elsewhere: RCSB PDB 1PV5 · PDBe 1PV5 · UniProt P96719
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