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Structure of mouse BAI1 (ADGRB1) TSR3 domain

Analyse Structure of mouse BAI1 (ADGRB1) TSR3 domain in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 7R85
Type: protein
Length: 44 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Vasculostatin-120
UniProt: Q3UHD1
Ligands: MAN, FUC, BGC

Structure

x-ray diffraction · 1 distinct chain · 0% helix, 36% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Vasculostatin-120	protein	44	0% helix, 36% strand	Q3UHD1

Ligands and binding sites

MAN · alpha-D-mannopyranose · sugar · 2 copies · chains A
FUC · alpha-L-fucopyranose · sugar · chains A
BGC · beta-D-glucopyranose · sugar · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 3 disulfide, 3 glycan (disulfide, C-mannosylation, O-glycosylation).

Compared structures

7R85 · Structure of mouse Bai1 (ADGRB1) TSR3 domain · the same entry in another collection · chain A against A, TM-score 1.00
Q3UHD1 · AlphaFold monomer V2.0 prediction for adhesion G protein-coupled receptor B1 (Q3UHD1) · a predicted model of the same protein · chain A against A, TM-score 0.77

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q3UHD1
Elsewhere: RCSB PDB 7R85 · PDBe 7R85 · UniProt Q3UHD1

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