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P13SUC1 in a strand-exchanged dimer

Analyse P13SUC1 in a strand-exchanged dimer in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1PUC
Type: protein
Length: 101 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: P13SUC1
UniProt: P08463
Ligands: CPS
Pockets: 1 · best druggability 0.60

Structure

x-ray diffraction · 1 distinct chain · 22% helix, 10% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	P13SUC1	protein	101	22% helix, 10% strand	P08463

Ligands and binding sites

CPS · 3-[(3-cholamidopropyl)dimethylammonio]-1-propanesulfonate · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	248	0.60	0.79	27	empty

Compared structures

1PUC · P13SUC1 in a strand-exchanged dimer · the same entry in another collection · chain A against A, TM-score 1.00
P08463 · AlphaFold monomer V2.0 prediction for cyclin-dependent kinases regulatory subunit (P08463) · a predicted model of the same protein · chain A against A, TM-score 0.79

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P08463
Elsewhere: RCSB PDB 1PUC · PDBe 1PUC · UniProt P08463

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