Research workbench
Crystal structure of the peptide transporter yepept-K314A at 2.93 a
Analyse Crystal structure of the peptide transporter yepept-K314A at 2.93 a in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7Q0L
- Type
- protein
- Length
- 482 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Peptide transporter yepept
- UniProt
- A0A2R9TD79
- Pockets
- 5 · best druggability 0.78
Structure
x-ray diffraction · 1 distinct chain · 78% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Peptide transporter yepept | protein | 482 | 78% helix, 1% strand | A0A2R9TD79 |
Pockets
5 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 828 | 0.78 | 0.81 | 68 | empty |
| 2 | 609 | 0.66 | 0.75 | 41 | empty |
| 3 | 198 | 0.53 | 0.77 | 27 | empty |
| 4 | 95 | 0.39 | 0.76 | 18 | empty |
| 5 | 59 | 0.29 | 0.73 | 11 | empty |
Compared structures
- 7Q0L · Crystal structure of the peptide transporter YePEPT-K314A at 2.93 A · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A2R9TD79
- Elsewhere: RCSB PDB 7Q0L · PDBe 7Q0L · UniProt A0A2R9TD79
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.