Research workbench
Dimethylated fusion protein of rsl and trimeric coiled coil (4DZN) in complex with CUCURBIT[7]URIL, H3 sheet assembly
Analyse Dimethylated fusion protein of rsl and trimeric coiled coil (4DZN) in complex… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7P2J
- Type
- protein
- Length
- 226 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Fucose-binding lectin protein
- UniProt
- A0A0S4TLR1
- Ligands
- QQ7, BMA, NA
Structure
x-ray diffraction · 1 distinct chain · 19% helix, 53% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Fucose-binding lectin protein | protein | 113 | 19% helix, 53% strand | A0A0S4TLR1 |
Ligands and binding sites
- QQ7 · cucurbit[7]uril · ligand · 2 copies · chains A, B
- BMA · beta-D-mannopyranose · sugar · 4 copies · chains A, B
- NA · Sodium ion · metal · 2 copies
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 68 Ų buried · 0 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 14 modified (methylation).
Compared structures
- 7P2J · Dimethylated fusion protein of RSL and trimeric coiled coil (4dzn) in complex with… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0S4TLR1
- Elsewhere: RCSB PDB 7P2J · PDBe 7P2J · UniProt A0A0S4TLR1
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