Research workbench
Cryo EM structure of bison NHA2 in detergent structure
Analyse Cryo EM structure of bison NHA2 in detergent structure in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7P1J
- Type
- protein
- Length
- 868 residues
- Chains
- 2
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Mitochondrial SODIUM/HYDROGEN exchanger 9B2
- UniProt
- A0A6P3HVI0
- Pockets
- 20 · best druggability 0.74
Structure
electron microscopy · 1 distinct chain · 74% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B, A | Mitochondrial SODIUM/HYDROGEN exchanger 9B2 | protein | 434 | 74% helix, 0% strand | A0A6P3HVI0 |
Pockets
20 pockets found on a 1 Å grid, 11 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 564 | 0.74 | 0.81 | 78 | empty |
| 2 | 359 | 0.68 | 0.82 | 31 | empty |
| 3 | 151 | 0.65 | 0.86 | 34 | empty |
| 4 | 251 | 0.63 | 0.81 | 34 | empty |
| 5 | 126 | 0.62 | 0.86 | 27 | empty |
Interfaces
1 interface between chains.
- B–A · 1143 Ų buried · 4 hydrogen bonds · protein-protein
Compared structures
- 7P1J · Cryo EM structure of bison NHA2 in detergent structure · the same entry in another collection · chain B against B, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A6P3HVI0
- Elsewhere: RCSB PDB 7P1J · PDBe 7P1J · UniProt A0A6P3HVI0
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.