Research workbench
The C146A variant of an amidase from pyrococcus horikoshii with bound acetamide
Analyse The C146A variant of an amidase from pyrococcus horikoshii with bound acetamide in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7OVG
- Type
- protein
- Length
- 526 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Cn hydrolase domain-containing protein
- UniProt
- O58376
- Ligands
- ACM, CL
Structure
x-ray diffraction · 1 distinct chain · 28% helix, 30% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Cn hydrolase domain-containing protein | protein | 263 | 28% helix, 30% strand | O58376 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 2213 Ų buried · 41 hydrogen bonds · protein-protein
Compared structures
- 7OVG · The C146A variant of an amidase from Pyrococcus horikoshii with bound acetamide · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O58376
- Elsewhere: RCSB PDB 7OVG · PDBe 7OVG · UniProt O58376
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