Research workbench
Crystal structure of apo NS3 helicase from tick-borne encephalitis virus
Analyse Crystal structure of apo NS3 helicase from tick-borne encephalitis virus in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7OJ4
- Type
- protein
- Length
- 426 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- NS3 helicase domain
- EC
- 3.6.4.13
- UniProt
- A0A2S1PWV0
- Pockets
- 3 · best druggability 0.80
Structure
x-ray diffraction · 1 distinct chain · 34% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | NS3 helicase domain (EC 3.6.4.13) | protein | 426 | 34% helix, 18% strand | A0A2S1PWV0 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 846 | 0.80 | 0.83 | 69 | empty |
| 2 | 168 | 0.60 | 0.84 | 28 | empty |
| 3 | 50 | 0.38 | 0.81 | 16 | empty |
Compared structures
- 7OJ4 · Crystal structure of apo NS3 helicase from tick-borne encephalitis virus · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A2S1PWV0
- Elsewhere: RCSB PDB 7OJ4 · PDBe 7OJ4 · UniProt A0A2S1PWV0
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