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Crystal structure of the pid-3 rrm domain

Analyse Crystal structure of the pid-3 rrm domain in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 7OCZ
Type: protein
Length: 162 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Protein pid-3
UniProt: O76616
Ligands: CL

Structure

x-ray diffraction · 1 distinct chain · 26% helix, 31% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Protein pid-3	protein	81	26% helix, 31% strand	O76616

Ligands and binding sites

CL · Chloride ion · ion · 2 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

1 interface between chains.

A–B · 584 Å² buried · 11 hydrogen bonds · protein-protein

Compared structures

7OCZ · Crystal Structure of the PID-3 RRM domain · the same entry in another collection · chain A against A, TM-score 1.00
O76616 · AlphaFold monomer V2.0 prediction for protein pid-3 (O76616) · a predicted model of the same protein · chain A against A, TM-score 0.90

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O76616
Elsewhere: RCSB PDB 7OCZ · PDBe 7OCZ · UniProt O76616

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