Research workbench
Accuracy and precision in protein crystal structure analysis: two independent refinements of the structure of poplar plastocyanin at 173K
Analyse Accuracy and precision in protein crystal structure analysis: two independent… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1PND
- Type
- protein
- Length
- 99 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Plastocyanin
- UniProt
- P00299
- Ligands
- CU
Structure
x-ray diffraction · 1 distinct chain · 6% helix, 37% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Plastocyanin | protein | 99 | 6% helix, 37% strand | P00299 |
Ligands and binding sites
- CU · Copper (II) ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 1PND · Accuracy and precision in protein crystal structure analysis: two independent refinements… · the same entry in another collection · chain A against A, TM-score 1.00
- P00299 · AlphaFold monomer V2.0 prediction for plastocyanin a, chloroplastic (P00299) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P00299
- Elsewhere: RCSB PDB 1PND · PDBe 1PND · UniProt P00299
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