Research workbench
Domain-wise fitting of the crystal structure of T.THERMOPHILUS ef-G into the low resolution MAP of the release COMPLEX.PUROMYCIN.EFG.GDPNP of E.COLI 70S ribosome.
Analyse Domain-wise fitting of the crystal structure of T.THERMOPHILUS ef-G into the… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1PN6
- Type
- protein
- Length
- 655 residues
- Chains
- 1
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Elongation factor G
- UniProt
- P13551
- Pockets
- 2 · best druggability 0.40
Structure
electron microscopy · 1 distinct chain · 0% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Elongation factor G | protein | 655 | 0% helix, 0% strand | P13551 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 123 | 0.40 | 0.73 | 31 | empty |
| 2 | 100 | 0.37 | 0.73 | 30 | empty |
Compared structures
- 1PN6 · Domain-wise fitting of the crystal structure of T.thermophilus EF-G into the low… · the same entry in another collection · chain A against A, TM-score 1.00
- P13551 · AlphaFold monomer V2.0 prediction for elongation factor G (P13551) · a predicted model of the same protein · chain A against A, TM-score 0.74
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P13551
- Elsewhere: RCSB PDB 1PN6 · PDBe 1PN6 · UniProt P13551
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