Research workbench
E. COLI DNA helicase ruva with bound DNA holliday junction, alpha carbons and phosphate atoms only
Analyse E. COLI DNA helicase ruva with bound DNA holliday junction, alpha carbons and… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1BDX
- Type
- protein
- Length
- 760 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Holliday junction DNA helicase ruva
- UniProt
- P0A809
Structure
x-ray diffraction · 1 distinct chain · 0% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C, D | Holliday junction DNA helicase ruva | protein | 190 | 0% helix, 0% strand | P0A809 |
Interfaces
4 interfaces between chains.
- B–D · 194 Ų buried · 0 hydrogen bonds · protein-protein
- A–D · 194 Ų buried · 0 hydrogen bonds · protein-protein
- A–C · 193 Ų buried · 0 hydrogen bonds · protein-protein
- B–C · 193 Ų buried · 0 hydrogen bonds · protein-protein
Compared structures
- 1BDX · E. COLI DNA helicase ruva with bound DNA holliday junction, alpha carbons and phosphate… · the same entry in another collection · chain A against A, TM-score 1.00
- P0A809 · AlphaFold monomer V2.0 prediction for holliday junction ATP-dependent DNA helicase ruva… · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0A809
- Elsewhere: RCSB PDB 1BDX · PDBe 1BDX · UniProt P0A809
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