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Crystallographic structure of human TSG101 uev domain in complex with a hev ORF3 peptide
Analyse Crystallographic structure of human TSG101 uev domain in complex with a hev… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7NLC
- Type
- protein
- Length
- 154 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- TSG101 uev domain; Protein ORF3
- UniProt
- Q99816, E9N3C1
- Ligands
- NH4, CL, SO4
Structure
x-ray diffraction · 2 distinct chains · 24% helix, 32% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TSG101 uev domain | protein | 144 | 26% helix, 33% strand | Q99816 |
| B | Protein ORF3 | protein | 10 | 0% helix, 10% strand | E9N3C1 |
Ligands and binding sites
- NH4 · Ammonium ion · ion · 50 copies · chains A, B
- CL · Chloride ion · ion · 2 copies · chains A
- SO4 · Sulfate ion · ion · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 556 Ų buried · 10 hydrogen bonds · protein-protein
Compared structures
- 7NLC · Crystallographic structure of human Tsg101 UEV domain in complex with a HEV ORF3 peptide · the same entry in another collection · chain A against A, TM-score 1.00
- Q99816 · AlphaFold monomer V2.0 prediction for tumor susceptibility gene 101 protein (Q99816) · a predicted model of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q99816
- Every structure of UniProt E9N3C1
- Elsewhere: RCSB PDB 7NLC · PDBe 7NLC · UniProt Q99816 · UniProt E9N3C1
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