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Solution structure of the domain III of the japan encephalitis virus envelope protein
Analyse Solution structure of the domain III of the japan encephalitis virus envelope… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1PJW
- Type
- protein
- Length
- 111 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Envelope protein
- UniProt
- Q9J0X3
- Pockets
- 2 · best druggability 0.65
Structure
solution nmr · 1 distinct chain · 0% helix, 38% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Envelope protein | protein | 111 | 0% helix, 38% strand | Q9J0X3 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 169 | 0.65 | 0.85 | 37 | empty |
| 2 | 54 | 0.33 | 0.77 | 14 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 1PJW · Solution Structure of the Domain III of the Japan Encephalitis Virus Envelope Protein · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9J0X3
- Elsewhere: RCSB PDB 1PJW · PDBe 1PJW · UniProt Q9J0X3
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