Research workbench
Zebrafish CNTN4 APLP2 complex
Analyse Zebrafish CNTN4 APLP2 complex in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7MQY
- Type
- protein
- Length
- 368 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Fusion protein of CNTN4 and APLP2
- UniProt
- Q08C52, A2BID8
- Pockets
- 3 · best druggability 0.55
Structure
x-ray diffraction · 1 distinct chain · 7% helix, 44% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Fusion protein of CNTN4 and APLP2 | protein | 368 | 7% helix, 44% strand | Q08C52, A2BID8 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 266 | 0.55 | 0.76 | 31 | empty |
| 2 | 94 | 0.38 | 0.75 | 14 | empty |
| 3 | 50 | 0.28 | 0.75 | 20 | empty |
Modifications
Observed in the structure: 6 disulfide (disulfide).
Compared structures
- 7MQY · Zebrafish CNTN4 APLP2 complex · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q08C52
- Every structure of UniProt A2BID8
- Elsewhere: RCSB PDB 7MQY · PDBe 7MQY · UniProt Q08C52 · UniProt A2BID8
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.