Research workbench
HLA-A*24:02 bound to neuroblastoma derived PHOX2B peptide
Analyse HLA-A*24:02 bound to neuroblastoma derived PHOX2B peptide in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7MJA
- Type
- protein
- Length
- 382 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q95J06, P61769, Q99453
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 274 | — | Q95J06 |
| B | — | protein | 99 | — | P61769 |
| C | — | protein | 9 | — | Q99453 |
Ligands and binding sites
- GOL · Glycerol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7MJA · HLA-A*24:02 bound to Neuroblastoma derived PHOX2B peptide · the same entry in another collection · chain A against A, TM-score 1.00
- P61769 · AlphaFold monomer V2.0 prediction for beta-2-microglobulin (P61769) · a predicted model of the same protein · chain B against A, TM-score 0.98
- Q99453 · AlphaFold monomer V2.0 prediction for paired mesoderm homeobox protein 2B (Q99453) · a predicted model of the same protein · chain C against A, TM-score 0.29
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q95J06
- Every structure of UniProt P61769
- Every structure of UniProt Q99453
- Elsewhere: RCSB PDB 7MJA · PDBe 7MJA · UniProt Q95J06 · UniProt P61769 · UniProt Q99453
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