Research workbench
Solution structure of the HIV-1 pbs-segment
Analyse Solution structure of the HIV-1 pbs-segment in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7LVA
- Type
- RNA
- Length
- 103 nucleotides
- Chains
- 1
- Method
- solution nmr; solution scattering
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- RNA (103-mer)
- Pockets
- 3 · best druggability 0.47
Structure
solution nmr; solution scattering · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA (103-mer) | rna | 103 | — | — |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 318 | 0.47 | 0.72 | 22 | empty |
| 2 | 131 | 0.38 | 0.74 | 9 | empty |
| 3 | 142 | 0.36 | 0.73 | 16 | empty |
Compared structures
- 7LVA · Solution structure of the HIV-1 PBS-segment · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 7LVA · PDBe 7LVA
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