Research workbench
G150A pseudomonas fluorescens isocyanide hydratase (G150A-2) at 274K, phenix-refined
Analyse G150A pseudomonas fluorescens isocyanide hydratase (G150A-2) at 274K… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7LD7
- Type
- protein
- Length
- 456 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Isonitrile hydratase inha
- UniProt
- Q4K977
- Pockets
- 3 · best druggability 0.58
Structure
x-ray diffraction · 2 distinct chains · 41% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Isonitrile hydratase inha | protein | 227 | 42% helix, 19% strand | Q4K977 |
| B | Isonitrile hydratase inha | protein | 229 | 41% helix, 19% strand | Q4K977 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 226 | 0.58 | 0.80 | 26 | empty |
| 2 | 239 | 0.56 | 0.78 | 24 | empty |
| 3 | 53 | 0.28 | 0.75 | 16 | empty |
Interfaces
1 interface between chains.
- A–B · 2513 Ų buried · 42 hydrogen bonds · protein-protein
Compared structures
- 7LD7 · G150A Pseudomonas fluorescens isocyanide hydratase (G150A-2) at 274K, Phenix-refined · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q4K977
- Elsewhere: RCSB PDB 7LD7 · PDBe 7LD7 · UniProt Q4K977
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