Research workbench
Fitting of GP27 into cryoem reconstruction of bacteriophage T4 baseplate
Analyse Fitting of GP27 into cryoem reconstruction of bacteriophage T4 baseplate in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1PDJ
- Type
- protein
- Length
- 1,092 residues
- Chains
- 3
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Baseplate structural protein GP27
- UniProt
- P17172
Structure
electron microscopy · 1 distinct chain · 0% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| D, E, F | Baseplate structural protein GP27 | protein | 364 | 0% helix, 0% strand | P17172 |
Interfaces
3 interfaces between chains.
- E–F · 139 Ų buried · 0 hydrogen bonds · protein-protein
- D–E · 138 Ų buried · 0 hydrogen bonds · protein-protein
- D–F · 138 Ų buried · 0 hydrogen bonds · protein-protein
Compared structures
- 1PDJ · Fitting of gp27 into cryoEM reconstruction of bacteriophage T4 baseplate · the same entry in another collection · chain D against D, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P17172
- Elsewhere: RCSB PDB 1PDJ · PDBe 1PDJ · UniProt P17172
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