Research workbench
NMR structure of a tRNA 2'-phosphotransferase from runella slithyformis
Analyse NMR structure of a tRNA 2'-phosphotransferase from runella slithyformis in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7KW8
- Type
- protein
- Length
- 178 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- TRNA 2'-phosphotransferase
- EC
- 2.7.1.160
- Pockets
- 2 · best druggability 0.40
Structure
solution nmr · 1 distinct chain · 35% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA 2'-phosphotransferase (EC 2.7.1.160) | protein | 178 | 35% helix, 20% strand | — |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 99 | 0.40 | 0.77 | 21 | empty |
| 2 | 78 | 0.34 | 0.74 | 18 | empty |
Compared structures
- 7KW8 · NMR Structure of a tRNA 2'-phosphotransferase from Runella slithyformis · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 7KW8 · PDBe 7KW8
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