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Crystal structure of the marr family transcriptional regulator from variovorax paradoxus bound to picloram

Analyse Crystal structure of the marr family transcriptional regulator from variovorax… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 7KJQ
Type: protein
Length: 140 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Transcriptional regulator, marr family
UniProt: C5CSP2
Ligands: WOM, SO4
Pockets: 1 · best druggability 0.60

Structure

x-ray diffraction · 1 distinct chain · 71% helix, 9% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Transcriptional regulator, marr family	protein	140	71% helix, 9% strand	C5CSP2

Ligands and binding sites

WOM · Picloram · ligand · chains A
SO4 · Sulfate ion · ion · 3 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	458	0.60	0.74	27	WOM

Compared structures

7KJQ · Crystal structure of the MarR family transcriptional regulator from Variovorax paradoxus… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt C5CSP2
Elsewhere: RCSB PDB 7KJQ · PDBe 7KJQ · UniProt C5CSP2

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