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Crystal structure of bacillus halodurans oapb (native) at 1.2 a

Analyse Crystal structure of bacillus halodurans oapb (native) at 1.2 a in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 7K9B
Type: protein
Length: 195 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Ole-associated protein B
UniProt: Q9KGD7
Ligands: CL
Pockets: 1 · best druggability 0.45

Structure

x-ray diffraction · 2 distinct chains · 35% helix, 29% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Ole-associated protein B	protein	98	35% helix, 29% strand	Q9KGD7
B	Ole-associated protein B	protein	97	35% helix, 29% strand	Q9KGD7

Ligands and binding sites

CL · Chloride ion · ion · 2 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	190	0.45	0.74	27	empty

Interfaces

1 interface between chains.

A–B · 255 Å² buried · 4 hydrogen bonds · protein-protein

Compared structures

7K9B · Crystal structure of Bacillus halodurans OapB (native) at 1.2 A · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9KGD7
Elsewhere: RCSB PDB 7K9B · PDBe 7K9B · UniProt Q9KGD7

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