Research workbench
The phi-28 GP11 DNA packaging motor
Analyse The phi-28 GP11 DNA packaging motor in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7JQ6
- Type
- protein
- Length
- 1,829 residues
- Chains
- 5
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- B1ABI1
- Ligands
- SO4
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 367 | — | B1ABI1 |
| B | — | protein | 366 | — | B1ABI1 |
| C, E | — | protein | 364 | — | B1ABI1 |
| D | — | protein | 368 | — | B1ABI1 |
Ligands and binding sites
- SO4 · Sulfate ion · ion · 11 copies · chains A, B, C, D, E
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7JQ6 · The Phi-28 gp11 DNA packaging Motor · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B1ABI1
- Elsewhere: RCSB PDB 7JQ6 · PDBe 7JQ6 · UniProt B1ABI1
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