Research workbench
Self-assembly of a 3D DNA crystal lattice (4X6 scramble junction version) containing the J34 immobile holliday junction with R3 symmetry
Analyse Self-assembly of a 3D DNA crystal lattice (4X6 scramble junction version)… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7JI6
- Type
- DNA
- Length
- 42 nucleotides
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Ligands
- CAC
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | dna | 12 | — | — |
| B | — | dna | 9 | — | — |
| C | — | dna | 6 | — | — |
| D | — | dna | 15 | — | — |
Ligands and binding sites
- CAC · Cacodylate ion · metal
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7JI6 · Self-assembly of a 3D DNA crystal lattice (4x6 scramble junction version) containing the… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 7JI6 · PDBe 7JI6
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