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Cytohesin-1/B2-1 SEC7 domain, NMR, minimized average structure

Analyse Cytohesin-1/B2-1 SEC7 domain, NMR, minimized average structure in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1BC9
Type: protein
Length: 200 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Cytohesin-1
UniProt: Q15438
Pockets: 5 · best druggability 0.65

Structure

solution nmr · 1 distinct chain · 52% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Cytohesin-1	protein	200	52% helix, 0% strand	Q15438

Pockets

5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	189	0.65	0.84	30	empty
2	119	0.49	0.80	17	empty
3	106	0.43	0.77	20	empty
4	69	0.42	0.80	18	empty
5	78	0.37	0.77	16	empty

Compared structures

1BC9 · Cytohesin-1/B2-1 SEC7 domain, NMR, minimized average structure · the same entry in another collection · chain A against A, TM-score 1.00
Q15438 · AlphaFold monomer V2.0 prediction for cytohesin-1 (Q15438) · a predicted model of the same protein · chain A against A, TM-score 0.70

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q15438
Elsewhere: RCSB PDB 1BC9 · PDBe 1BC9 · UniProt Q15438

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