Research workbench
Outer surface protein B of B. burgdorferi: crystal structure of the C-terminal fragment
Analyse Outer surface protein B of B. burgdorferi: crystal structure of the C-terminal… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1P4P
- Type
- protein
- Length
- 140 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Outer surface protein B
- UniProt
- P17739
- Pockets
- 1 · best druggability 0.37
Structure
x-ray diffraction · 1 distinct chain · 9% helix, 56% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Outer surface protein B | protein | 140 | 9% helix, 56% strand | P17739 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 82 | 0.37 | 0.76 | 18 | empty |
Compared structures
- 1P4P · Outer Surface Protein B of B. burgdorferi: crystal structure of the C-terminal fragment · the same entry in another collection · chain A against A, TM-score 1.00
- P17739 · AlphaFold monomer V2.0 prediction for outer surface protein B (P17739) · a predicted model of the same protein · chain A against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P17739
- Elsewhere: RCSB PDB 1P4P · PDBe 1P4P · UniProt P17739
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