Research workbench
Crystal structure of the complex formed by wolbachia cytoplasmic incompatibility factors cina and cinb from wpip
Analyse Crystal structure of the complex formed by wolbachia cytoplasmic… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7ET0
- Type
- protein
- Length
- 2,158 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Bacteria factor B; Bacteria factor a
- UniProt
- B3CP74, B3CP73
- Pockets
- 20 · best druggability 0.89
Structure
x-ray diffraction · 4 distinct chains · 49% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Bacteria factor B | protein | 665 | 37% helix, 26% strand | B3CP74 |
| B | Bacteria factor a | protein | 405 | 71% helix, 2% strand | B3CP73 |
| C | Bacteria factor B | protein | 684 | 36% helix, 27% strand | B3CP74 |
| D | Bacteria factor a | protein | 404 | 69% helix, 2% strand | B3CP73 |
Pockets
20 pockets found on a 1 Å grid, 13 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1076 | 0.89 | 0.90 | 141 | empty |
| 2 | 779 | 0.87 | 0.90 | 89 | empty |
| 3 | 502 | 0.85 | 0.91 | 73 | empty |
| 4 | 941 | 0.74 | 0.78 | 69 | empty |
| 5 | 202 | 0.70 | 0.87 | 30 | empty |
Interfaces
5 interfaces between chains.
- C–D · 2659 Ų buried · 48 hydrogen bonds · protein-protein
- A–B · 2649 Ų buried · 41 hydrogen bonds · protein-protein
- B–C · 439 Ų buried · 2 hydrogen bonds · protein-protein
- A–D · 426 Ų buried · 3 hydrogen bonds · protein-protein
- A–C · 102 Ų buried · 1 hydrogen bond · protein-protein
Compared structures
- 7ET0 · Crystal structure of the complex formed by Wolbachia cytoplasmic incompatibility factors… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B3CP74
- Every structure of UniProt B3CP73
- Elsewhere: RCSB PDB 7ET0 · PDBe 7ET0 · UniProt B3CP74 · UniProt B3CP73
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