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Crystal structure of wolbachia cytoplasmic incompatibility factor cida from wpip

Analyse Crystal structure of wolbachia cytoplasmic incompatibility factor cida from wpip in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 7ESX
Type: protein
Length: 841 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Bacteria factor 1
UniProt: B3CP62
Pockets: 9 · best druggability 0.80

Structure

x-ray diffraction · 2 distinct chains · 67% helix, 3% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Bacteria factor 1	protein	423	66% helix, 3% strand	B3CP62
B	Bacteria factor 1	protein	418	67% helix, 3% strand	B3CP62

Pockets

9 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	1115	0.80	0.81	94	empty
2	668	0.78	0.83	79	empty
3	154	0.54	0.81	29	empty
4	134	0.53	0.81	19	empty
5	86	0.50	0.83	15	empty

Interfaces

1 interface between chains.

A–B · 905 Å² buried · 12 hydrogen bonds · protein-protein

Compared structures

7ESX · Crystal structure of Wolbachia cytoplasmic incompatibility factor CidA from wPip · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt B3CP62
Elsewhere: RCSB PDB 7ESX · PDBe 7ESX · UniProt B3CP62

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