Research workbench
Recombinant alfalfa mosaic virus coat protein virus-like particle (ramv-cp vlp)
Analyse Recombinant alfalfa mosaic virus coat protein virus-like particle (ramv-cp vlp) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7EPP
- Type
- protein
- Length
- 167 residues
- Chains
- 1
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Capsid protein
- UniProt
- P05673
- Pockets
- 2 · best druggability 0.30
Structure
electron microscopy · 1 distinct chain · 8% helix, 38% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| a | Capsid protein | protein | 167 | 8% helix, 38% strand | P05673 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 57 | 0.30 | 0.76 | 13 | empty |
| 2 | 53 | 0.27 | 0.74 | 15 | empty |
Compared structures
- 7EPP · Recombinant Alfalfa Mosaic virus coat protein virus-like particle (rAMV-CP VLP) · the same entry in another collection · chain a against a, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P05673
- Elsewhere: RCSB PDB 7EPP · PDBe 7EPP · UniProt P05673
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.