Research workbench
Oxy-deoxy intermediate of 400 kda giant hemoglobin at 21% oxygen saturation
Analyse Oxy-deoxy intermediate of 400 kda giant hemoglobin at 21% oxygen saturation in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7E98
- Type
- protein
- Length
- 573 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q7M419, Q7M413, Q7M418, B1Q3G1
- Ligands
- HEM, OXY
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 140 | — | Q7M419 |
| B | — | protein | 142 | — | Q7M413 |
| C | — | protein | 146 | — | Q7M418 |
| D | — | protein | 145 | — | B1Q3G1 |
Ligands and binding sites
- HEM · Protoporphyrin IX containing Fe · ligand · 4 copies · chains A, D, B, C
- OXY · Oxygen molecule · ion · 4 copies · chains A, B, C, D
- GOL · Glycerol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7E98 · Oxy-deoxy intermediate of 400 kDa giant hemoglobin at 21% oxygen saturation · the same entry in another collection · chain A against A, TM-score 1.00
- Q7M413 · AlphaFold monomer V2.0 prediction for extracellular giant hemoglobin major globin subunit… · a predicted model of the same protein · chain B against A, TM-score 0.98
- Q7M418 · AlphaFold monomer V2.0 prediction for extracellular giant hemoglobin major globin subunit… · a predicted model of the same protein · chain C against A, TM-score 0.97
- Q7M419 · AlphaFold monomer V2.0 prediction for extracellular giant hemoglobin major globin subunit… · a predicted model of the same protein · chain A against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q7M419
- Every structure of UniProt Q7M413
- Every structure of UniProt Q7M418
- Every structure of UniProt B1Q3G1
- Elsewhere: RCSB PDB 7E98 · PDBe 7E98 · UniProt Q7M419 · UniProt Q7M413 · UniProt Q7M418 · UniProt B1Q3G1
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.