Research workbench
Snoal-like domain-containing protein
Analyse Snoal-like domain-containing protein in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7E85
- Type
- protein
- Length
- 342 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Snoal-like domain-containing protein
- UniProt
- P72035
- Pockets
- 2 · best druggability 0.63
Structure
x-ray diffraction · 1 distinct chain · 30% helix, 45% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| C, A, B | Snoal-like domain-containing protein | protein | 114 | 30% helix, 45% strand | P72035 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 353 | 0.63 | 0.79 | 55 | empty |
| 2 | 80 | 0.42 | 0.79 | 16 | empty |
Interfaces
2 interfaces between chains.
- C–A · 995 Ų buried · 9 hydrogen bonds · protein-protein
- A–B · 573 Ų buried · 7 hydrogen bonds · protein-protein
Compared structures
- 7E85 · SnoaL-like domain-containing protein · the same entry in another collection · chain B against B, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P72035
- Elsewhere: RCSB PDB 7E85 · PDBe 7E85 · UniProt P72035
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