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Crystal structure of rsl mutant in complex with sugar ligand

Analyse Crystal structure of rsl mutant in complex with sugar ligand in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 7E7W
Type: protein
Length: 792 residues
Chains: 3
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Fucose-binding lectin PROTEIN,FUCOSE-binding lectin PROTEIN,FUCOSE-binding lectin protein
UniProt: A0A0S4TLR1
Pockets: 9 · best druggability 0.85

Structure

x-ray diffraction · 1 distinct chain · 0% helix, 65% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B, C	Fucose-binding lectin PROTEIN,FUCOSE-binding lectin PROTEIN,FUCOSE-binding lectin protein	protein	264	0% helix, 65% strand	A0A0S4TLR1

Pockets

9 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	1102	0.85	0.86	94	empty
2	1173	0.84	0.86	100	empty
3	534	0.74	0.82	48	empty
4	87	0.39	0.78	20	empty
5	91	0.38	0.76	24	empty

Interfaces

2 interfaces between chains.

B–C · 800 Å² buried · 5 hydrogen bonds · protein-protein
A–B · 745 Å² buried · 9 hydrogen bonds · protein-protein

Compared structures

7E7W · Crystal structure of RSL mutant in complex with sugar Ligand · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0A0S4TLR1
Elsewhere: RCSB PDB 7E7W · PDBe 7E7W · UniProt A0A0S4TLR1

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