Research workbench
Crystal structure of cyanobacterial circadian clock protein kaic
Analyse Crystal structure of cyanobacterial circadian clock protein kaic in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7DY1
- Type
- protein
- Length
- 2,731 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q79V60
- Ligands
- ATP, MG
Structure
x-ray diffraction · 6 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 454 | — | Q79V60 |
| B | — | protein | 452 | — | Q79V60 |
| C | — | protein | 456 | — | Q79V60 |
| D | — | protein | 458 | — | Q79V60 |
| E | — | protein | 455 | — | Q79V60 |
| F | — | protein | 456 | — | Q79V60 |
Ligands and binding sites
- ATP · Adenosine-5'-triphosphate · ligand · 12 copies · chains A, B, C, D, E, F
- MG · Magnesium ion · metal · 12 copies · chains A, B, C, D, E, F
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7DY1 · Crystal Structure of Cyanobacterial Circadian Clock Protein KaiC · the same entry in another collection · chain F against F, TM-score 1.00
- Q79V60 · AlphaFold monomer V2.0 prediction for circadian clock protein kinase kaic (Q79V60) · a predicted model of the same protein · chain F against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q79V60
- Elsewhere: RCSB PDB 7DY1 · PDBe 7DY1 · UniProt Q79V60
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