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Structure of a novel beta-mannanase BAMAN113A from bacillus sp. N16-5, N236Y mutation.

Analyse Structure of a novel beta-mannanase BAMAN113A from bacillus sp. N16-5, N236Y… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 7DVZ
Type: protein
Length: 640 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Endo-beta-1,4-mannanase
UniProt: A0A140EH91
Pockets: 4 · best druggability 0.64

Structure

x-ray diffraction · 2 distinct chains · 40% helix, 19% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Endo-beta-1,4-mannanase	protein	326	40% helix, 18% strand	A0A140EH91
B	Endo-beta-1,4-mannanase	protein	314	41% helix, 19% strand	A0A140EH91

Pockets

4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	428	0.64	0.77	47	empty
2	401	0.63	0.77	52	empty
3	62	0.39	0.80	12	empty
4	54	0.39	0.81	12	empty

Interfaces

1 interface between chains.

A–B · 1009 Å² buried · 3 hydrogen bonds · protein-protein

Compared structures

7DVZ · Structure of a novel beta-mannanase BaMan113A from Bacillus sp. N16-5, N236Y mutation. · the same entry in another collection · chain A against A, TM-score 1.00

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Every structure of UniProt A0A140EH91
Elsewhere: RCSB PDB 7DVZ · PDBe 7DVZ · UniProt A0A140EH91

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