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Crystal structure of heme sensor protein pefr from streptococcus agalactiae in complex with heme

Analyse Crystal structure of heme sensor protein pefr from streptococcus agalactiae in… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
7DVR
Type
protein
Length
147 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Hth marr-type domain-containing protein
UniProt
Q8E4J9
Ligands
HEM, CO

Structure

x-ray diffraction · 1 distinct chain · 65% helix, 8% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AHth marr-type domain-containing proteinprotein14765% helix, 8% strandQ8E4J9

Ligands and binding sites

  • HEM · Protoporphyrin IX containing Fe · ligand · chains A
  • CO · Cobalt (II) ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 7DVR · Crystal structure of heme sensor protein PefR from Streptococcus agalactiae in complex… · the same entry in another collection · chain A against A, TM-score 1.00

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