Research workbench
Crystal structure of the RECA2 domain of RNA helicase cgh-1 in C. elegans
Analyse Crystal structure of the RECA2 domain of RNA helicase cgh-1 in C. elegans in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7DTJ
- Type
- protein
- Length
- 173 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- ATP-dependent RNA helicase cgh-1
- EC
- 3.6.4.13
- UniProt
- Q95YF3
- Pockets
- 1 · best druggability 0.75
Structure
x-ray diffraction · 1 distinct chain · 38% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | ATP-dependent RNA helicase cgh-1 (EC 3.6.4.13) | protein | 173 | 38% helix, 22% strand | Q95YF3 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 347 | 0.75 | 0.86 | 47 | empty |
Compared structures
- 7DTJ · Crystal structure of the RecA2 domain of RNA helicase CGH-1 in C. elegans · the same entry in another collection · chain A against A, TM-score 1.00
- Q95YF3 · AlphaFold monomer V2.0 prediction for ATP-dependent RNA helicase cgh-1 (Q95YF3) · a predicted model of the same protein · chain A against A, TM-score 0.91
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q95YF3
- Elsewhere: RCSB PDB 7DTJ · PDBe 7DTJ · UniProt Q95YF3
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