Research workbench
Cryo-EM structure of coxsackievirus B1 mature virion in complex with nab 5F5
Analyse Cryo-EM structure of coxsackievirus B1 mature virion in complex with nab 5F5 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7DQ7
- Type
- protein
- Length
- 1,039 residues
- Chains
- 6
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- W8GTF7, A0A2S0RQC2, L7UV52, A0A2S1FMR1
- Ligands
- PLM
Structure
electron microscopy · 6 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 267 | — | W8GTF7 |
| B | — | protein | 252 | — | A0A2S0RQC2 |
| C | — | protein | 237 | — | L7UV52 |
| D | — | protein | 54 | — | A0A2S1FMR1 |
| L | — | protein | 106 | — | — |
| H | — | protein | 123 | — | — |
Ligands and binding sites
- PLM · Palmitic acid · ligand · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7DQ7 · Cryo-EM structure of Coxsackievirus B1 mature virion in complex with nAb 5F5 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt W8GTF7
- Every structure of UniProt A0A2S0RQC2
- Every structure of UniProt L7UV52
- Every structure of UniProt A0A2S1FMR1
- Elsewhere: RCSB PDB 7DQ7 · PDBe 7DQ7 · UniProt W8GTF7 · UniProt A0A2S0RQC2 · UniProt L7UV52 · UniProt A0A2S1FMR1
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