Research workbench
Crystal structure of outer membrane protein porb with G103K mutations from neisseria meningitidis W135
Analyse Crystal structure of outer membrane protein porb with G103K mutations from… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7DE8
- Type
- protein
- Length
- 341 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Outer membrane protein
- UniProt
- M4GGR4
- Pockets
- 3 · best druggability 0.70
Structure
x-ray diffraction · 1 distinct chain · 5% helix, 59% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| X | Outer membrane protein | protein | 341 | 5% helix, 59% strand | M4GGR4 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 919 | 0.70 | 0.76 | 94 | empty |
| 2 | 124 | 0.63 | 0.87 | 23 | empty |
| 3 | 194 | 0.47 | 0.75 | 33 | empty |
Compared structures
- 7DE8 · Crystal Structure of outer membrane protein PorB with G103K mutations from Neisseria… · the same entry in another collection · chain X against X, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt M4GGR4
- Elsewhere: RCSB PDB 7DE8 · PDBe 7DE8 · UniProt M4GGR4
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