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Cryo-EM structure of the deah-box helicase PRP2 and coactivator SPP2

Analyse Cryo-EM structure of the deah-box helicase PRP2 and coactivator SPP2 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
7DCP
Type
protein
Length
732 residues
Chains
2
Method
electron microscopy
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
A0A6A5Q5S8, A0A6A5Q6Y7
Ligands
ADP, MG

Structure

electron microscopy · 2 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
x—protein670—A0A6A5Q5S8
y—protein62—A0A6A5Q6Y7

Ligands and binding sites

  • ADP · Adenosine-5'-diphosphate · ligand · chains x
  • MG · Magnesium ion · metal · chains x

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 7DCP · cryo-EM structure of the DEAH-box helicase Prp2 and coactivator Spp2 · the same entry in another collection · chain x against x, TM-score 1.00

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