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Solution structure of the Z-DNA binding domain of the vaccinia virus gene E3L

Analyse Solution structure of the Z-DNA binding domain of the vaccinia virus gene E3L in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1OYI
Type: protein
Length: 62 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Double-stranded RNA-binding protein
UniProt: Q86638
Pockets: 1 · best druggability 0.49

Structure

solution nmr · 1 distinct chain · 52% helix, 11% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Double-stranded RNA-binding protein	protein	62	52% helix, 11% strand	Q86638

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	123	0.49	0.79	26	empty

Compared structures

1OYI · Solution structure of the Z-DNA binding domain of the vaccinia virus gene E3L · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q86638
Elsewhere: RCSB PDB 1OYI · PDBe 1OYI · UniProt Q86638

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