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Human LC8 bound to ebola virus VP35(67-76)

Analyse Human LC8 bound to ebola virus VP35(67-76) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 7D35
Type: protein
Length: 96 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Dynein light chain 1, cytoplasmic; Peptide from polymerase cofactor VP35
UniProt: P63167, Q6V1Q9

Structure

x-ray diffraction · 2 distinct chains · 34% helix, 38% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Dynein light chain 1, cytoplasmic	protein	86	38% helix, 36% strand	P63167
B	Peptide from polymerase cofactor VP35	protein	10	0% helix, 50% strand	Q6V1Q9

Interfaces

1 interface between chains.

A–B · 667 Å² buried · 21 hydrogen bonds · protein-protein

Compared structures

7D35 · Human LC8 bound to ebola virus VP35(67-76) · the same entry in another collection · chain A against A, TM-score 1.00
P63167 · AlphaFold monomer V2.0 prediction for dynein light chain 1, cytoplasmic (P63167) · a predicted model of the same protein · chain A against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P63167
Every structure of UniProt Q6V1Q9
Elsewhere: RCSB PDB 7D35 · PDBe 7D35 · UniProt P63167 · UniProt Q6V1Q9

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