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Crystal structure of thioacyl-glyceraldehyde-3-phosphate dehydrogenase 1(GAPDH 1) from escherichia COLI at 1.77 ångström resolution

Analyse Crystal structure of thioacyl-glyceraldehyde-3-phosphate dehydrogenase 1(GAPDH… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 7C7K
Type: protein
Length: 1,339 residues
Chains: 4
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: A0A140NCK4
Ligands: G3H, ACN, NAD, PO4

Structure

x-ray diffraction · 4 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
O	—	protein	337	—	A0A140NCK4
P	—	protein	333	—	A0A140NCK4
Q	—	protein	335	—	A0A140NCK4
R	—	protein	334	—	A0A140NCK4

Ligands and binding sites

G3H · Glyceraldehyde-3-phosphate · ligand · 4 copies · chains O, P, Q, R
ACN · Acetone · ligand · 3 copies · chains P, Q, R
NAD · Nicotinamide-adenine-dinucleotide · ligand · 2 copies · chains Q, R
PO4 · Phosphate ion · ion · 2 copies · chains O, P, Q, R
EDO · 1,2-ethanediol · additive · 12 copies · chains O, P, Q, R
PEG · Di(hydroxyethyl)ether · additive · 2 copies · chains O, R

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

7C7K · Crystal Structure of Thioacyl-Glyceraldehyde-3-phosphate dehydrogenase 1(GAPDH 1) from… · the same entry in another collection · chain O against O, TM-score 1.00

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Every structure of UniProt A0A140NCK4
Elsewhere: RCSB PDB 7C7K · PDBe 7C7K · UniProt A0A140NCK4

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