Research workbench
Mycobacterium bovis ahpc
Analyse Mycobacterium bovis ahpc in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7BZ6
- Type
- protein
- Length
- 349 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Alkyl hydroperoxide reductase C peptide
- UniProt
- Q79CV0
- Pockets
- 4 · best druggability 0.79
Structure
x-ray diffraction · 2 distinct chains · 30% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alkyl hydroperoxide reductase C peptide | protein | 170 | 30% helix, 25% strand | Q79CV0 |
| B | Alkyl hydroperoxide reductase C peptide | protein | 179 | 31% helix, 24% strand | Q79CV0 |
Pockets
4 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 124 | 0.79 | 0.97 | 31 | empty |
| 2 | 180 | 0.74 | 0.90 | 26 | empty |
| 3 | 127 | 0.71 | 0.91 | 25 | empty |
| 4 | 64 | 0.32 | 0.76 | 15 | empty |
Interfaces
1 interface between chains.
- A–B · 1029 Ų buried · 11 hydrogen bonds · protein-protein
Compared structures
- 7BZ6 · Mycobacterium bovis AhpC · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q79CV0
- Elsewhere: RCSB PDB 7BZ6 · PDBe 7BZ6 · UniProt Q79CV0
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