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Crystal structure of cyclic alpha-maltosyl-1,6-maltose binding protein from arthrobacter globiformis

Analyse Crystal structure of cyclic alpha-maltosyl-1,6-maltose binding protein from… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 7BVT
Type: protein
Length: 391 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Hypothetical sugar ABC-transporter sugar binding protein
UniProt: D2YYD8
Ligands: GLC
Pockets: 2 · best druggability 0.50

Structure

x-ray diffraction · 1 distinct chain · 50% helix, 17% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Hypothetical sugar ABC-transporter sugar binding protein	protein	391	50% helix, 17% strand	D2YYD8

Ligands and binding sites

GLC · alpha-D-glucopyranose · sugar · 3 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	254	0.50	0.74	41	GLC
2	114	0.38	0.75	18	empty

Compared structures

7BVT · Crystal structure of cyclic alpha-maltosyl-1,6-maltose binding protein from Arthrobacter… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt D2YYD8
Elsewhere: RCSB PDB 7BVT · PDBe 7BVT · UniProt D2YYD8

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