Research workbench
Eucommia ulmoides TPT3, crystal form 1
Analyse Eucommia ulmoides TPT3, crystal form 1 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7BUU
- Type
- protein
- Length
- 677 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- FPS3
- UniProt
- A0A1L3KPU1
- Pockets
- 4 · best druggability 0.76
Structure
x-ray diffraction · 2 distinct chains · 75% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | FPS3 | protein | 339 | 74% helix, 0% strand | A0A1L3KPU1 |
| B | FPS3 | protein | 338 | 75% helix, 0% strand | A0A1L3KPU1 |
Pockets
4 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1098 | 0.76 | 0.79 | 86 | empty |
| 2 | 846 | 0.73 | 0.78 | 80 | empty |
| 3 | 664 | 0.70 | 0.78 | 72 | empty |
| 4 | 60 | 0.27 | 0.73 | 16 | empty |
Interfaces
1 interface between chains.
- A–B · 2014 Ų buried · 8 hydrogen bonds · protein-protein
Compared structures
- 7BUU · Eucommia ulmoides TPT3, crystal form 1 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A1L3KPU1
- Elsewhere: RCSB PDB 7BUU · PDBe 7BUU · UniProt A0A1L3KPU1
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